YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|52003252, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEEKSTNKK NSLFEWVKAI IIAVVLALLI RAFLFEPYLV EGTSMDPTLH DGERLFVYKT  60
   61 VRYVGEFKRG DIVIIDGDEK NVHYVKRLIG LPGDTVQMKD DTLYINGKKV SEPYLSENRK 120
  121 EAEAVGVKLT GDFGPVKVPE GKYFVMGDNR QRSMDSRNGL GLIDKKRVAG TSQFVFFPFN 180
  181 EIRKTD

Type	Start	End	Confidence
Cytoplasmic	1	15	0.82
Transmembrane Helix	16	35	0.89
Non-Cytoplasmic	36	186	0.95