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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LYAM2_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.96
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNASRFLSAL VFVLLAGEST AWYYNASSEL MTYDEASAYC QRDYTHLVAI QNKEEINYLN  60
   61 SNLKHSPSYY WIGIRKVNNV WIWVGTGKPL TEEAQNWAPG EPNNKQRNED CVEIYIQRTK 120
  121 DSGMWNDERC NKKKLALCYT ASCTNASCSG HGECIETINS YTCKCHPGFL GPNCEQAVTC 180
  181 KPQEHPDYGS LNCSHPFGPF SYNSSCSFGC KRGYLPSSME TTVRCTSSGE WSAPAPACHV 240
  241 VECEALTHPA HGIRKCSSNP GSYPWNTTCT FDCVEGYRRV GAQNLQCTSS GIWDNETPSC 300
  301 KAVTCDAIPQ PQNGFVSCSH STAGELAFKS SCNFTCEQSF TLQGPAQVEC SAQGQWTPQI 360
  361 PVCKAVQCEA LSAPQQGNMK CLPSASGPFQ NGSSCEFSCE EGFELKGSRR LQCGPRGEWD 420
  421 SKKPTCSAVK CDDVPRPQNG VMECAHATTG EFTYKSSCAF QCNEGFSLHG SAQLECTSQG 480
  481 KWTQEVPSCQ VVQCPSLDVP GKMNMSCSGT AVFGTVCEFT CPDDWTLNGS AVLTCGATGR 540
  541 WSGMPPTCEA PVSPTRPLVV ALSAAGTSLL TSSSLLYLLM RYFRKKAKKF VPASSCQSLQ 600
  601 SFENYHVPSY NV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle