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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CE49298
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQFRNKNNS MNRIARHLRN VARRKGSSLL LFLMLSTVLV AAKEDDPARL VVRPDSSTVV  60
   61 DESKISFFCR ADGNPLPSVI WRVNGKSITD HNRISIKSLA TGLSTLRFER VSLDDNATVV 120
  121 SCSADNGVAN PVVAEASLTV VPRDKVPIGF PQIELHPSLK SVEQGKTAYV SCRVRGDPRA 180
  181 KVLWLRDLIP LDIRADGRYS VSTIGNPGAL MIQHAREEDQ GKYECIARNT LGVAHSKAAN 240
  241 LYVKVRRVPP YFSYKLERQY VVGVGGNINL TCVAVGYPMP RVFWKKTDLM VLDDPSTAPI 300
  301 GKNVLTLTHV ESTENFTCVA VSALGNIEAT TTVIAKELPP PPVNIVVSSV TSESVVITWK 360
  361 PPKYNEAINK YVVNYRLKYS EGRSSRGKTM ETLENSLVID GLVAFQTYEF TVRSAGPVGV 420
  421 GLESLPVEAQ TKPSKPATAP VSPQARSLNR DSILVKWGPC EQPNGLITGY KVYYTNDLVT 480
  481 TPIREWKQHD AKSDEFMTTI NGLEPDSRYF VRVIAQNSEG DSPLSTLVTV ATRQGIPGQP 540
  541 PMLTVKALDS RRMQLTWDKP LYSSPVVGYT VRYNTSDGEK ELTLTSPHEK HVVTGLHPDK 600
  601 YYYFRVAAYS DRGQGEFTEP MISKTIASIP LSSPTIVSAA ATSSKSVEIR WKGPEQKKLN 660
  661 GVLTAYRINY FRLEDSKTAN LESVEYDEDM DDSSSFLDRM SVVVPSDATS YVLSDLLPYS 720
  721 SYEITVAAST MDGYGPESSI RVVKTLEDVP SAPRNFNAEL TSATSVKLTW DAPAAANGAL 780
  781 LGYYVYLDRM VNGEPVVEKG SKKRIVMIRD SSKRYFELDS LDPNTEYSFR LNAFNRNGDG 840
  841 EFSERKSIIT QGIPPEAPEI VSVSLDRDEP PVVARIEWKM PKMKPNETPI EKYNLWLRAQ 900
  901 GYPDSYVKAK TVDGTDLSTT ISGLWMGVVY DVLLAAENRE GRSQNATETI ATPVGSPDGE 960
  961 PIDVQYEVMK GKIVVSWRPP SEEKRNGNIT SYKAILSAMD ATADRYEQPV PAPSTSSTFE1020
 1021 VNVRRAYLFK VAAATMKGIG PYSPVLTINP DPAALVGPPT NVRVEATSNS TAVVQWDFES1080
 1081 QKADSFVVKY MHEPGNRMDT EKWKQLPVVS IDKENPKRFA VVSDLNAHKP YAFCVLAVKN1140
 1141 NLTLNEQFNK VRVTNYMTNF QRQGPCSDPP TVLESVTPTY MVQNLRVLWK TSNSVQLTWE1200
 1201 YNGPRNVGFY VNHTGRKDYV NHELQEKTMS TPGFGQDVDE KHREYLWTNL RPHMMYTIHV1260
 1261 GVRTLPPGAR KYWPQEVVTI TDPTGPPFVD VPKLVDSSGT QPGQQMIRLT PATEEYGPIS1320
 1321 HYWIILVPAN YSTEDVVNLD PIELEKATAE KRAQLARSLS VSPSKKLKRK ASEVGDDSQS1380
 1381 ASYHPKEKRA RRATVPGAYV TARLSADRVK QQYRNNQPFI VGDSQLYDGF TNYPLEHNLH1440
 1441 YRLMMRAFAK NDVRTKDSFE QRAPMSEKLS RMYSDSVLTE PFTIKSALRG ASQKSSPWVG1500
 1501 ACIAFLVLFS IVGMLICWWL RCNKKSAGRH PRHGSITKVA LTGNIMNGGG GIPGETSKLL1560
 1561 STSNEYGRQI MNPYEQMNGN HHMESSMDLY PLPTSHSRSN GYAPVPVAIP SLPNNGNNMT1620
 1621 TVSHPAVPIA ELANHIERLR MNNNAGFQSE FESIETGQHF TWEHSSADMN KHKNRYANVA1680
 1681 AYDHSRVVLS NVEGYPGMDY INANYVDGYD KPRSYIATQG PLPETFSDFW RMVWEEQSVT1740
 1741 IVMLTNLEER SRVKCDQYWP SRGTATYGDI EVTLLESVHL AHYTMRTMRL KMVGEPEVRE1800
 1801 IKHLQYTAWP DHGVPDHPTP FLIFLKRVKT LNPNDAGPII SHCSAGIGRT GAFIVIDCML1860
 1861 ERLRYDNTVD IYGCVTALRA QRSYMVQTEE QYIFIHDAVL DAVNSGSTEV PASRLHQHLH1920
 1921 ILSQPSADQL SGIDMEFRHL TTLKWTSNRC TVANLPVNRP KNRMLSAVPY DSNRVIMRLL1980
 1981 PGADGSDYIN ASWIDGYKER GAYIATQAPT NETAADFWRA IWEHNSPIIA MLVRTNERGQ2040
 2041 EQCSDYWPLE TGVQVGMLVV EPMAEYDMKH YHLREFRISD INTREVRTVR QFHFMEWPDV2100
 2101 GKPHTADHFL DFVTQVHNTY AQFGCTGPIT VHCCSGAGRT AVFIALSIIL DRMRAEHVVD2160
 2161 VFTTVKLLRT ERQNMIQEPE QYHFLYLAAY EYLAAYDNFS 

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