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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: XRCC6_CHICK
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMWVLGEVG MAVLSAAAMA DWVSYYRGDG PDEEEDGEQQ EEEGPEAVAD YRFSGRDSLI  60
   61 FLVDASKAMF EPYENEEAAT PFDMTMQCIR NVYTSKIISS DKDLLSVVFY GMENNKNSAD 120
  121 FKHIYVLQEL DNPGAKRILE LDQYRGDEGR VLFRETFGHN ADYSLGEALW ACSNLFSDVR 180
  181 VRLSHKRIML FTNEDNPHAN DSAKAKLART RAGDLRDTGI ILDLMHLKKP GGFDISLFYR 240
  241 DIINVAEDED LGIQPDESGK LEHLMKKVRA KETRKRALSR LNLYLNKDLS FSVGVYNLIQ 300
  301 KAYKPYPVKL YRETNEPVKT KTRVFNGKTG SLLLPSDTKR AQTYGNRQIA MEKEETEEVK 360
  361 RFDSPGLFLI GFKPLSMLKQ HHHIRPSQFM YPEESLVTGS TTLFNALLMK CLEKEVMALC 420
  421 RYIARRNTPP RIVALIPQEE EVDEQKVQIA PPGFHIIFLP YADDKRNVDF TEKVPANREQ 480
  481 VDKMKGIIQK LRFKYRTDSF ENPVLQQHFR NLEALALDML EPEQAEDLTM PKTEEMSRRL 540
  541 GNLVEEFKQL VYPPDYSPEG KAAKRKQAGD AQAEKRPKIE ISEDSLRSYV QNGTLGKLTV 600
  601 SALKDTCRHY GLRSGGKKQE LIDALTEYFS GR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle