YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|238880825
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRQFQIILIS LVVSIIRCVV ADVDITSPKS GETFSGSSGS ASIKITWDDS DDSDSPKSLD  60
   61 NAKGYTISLC TGPTSDGDIQ CLDPLVKNEA IAGKSKTVSI PQNSVPNGYY YFQIYVTFTN 120
  121 GGTTIHYSPR FKLTGMSGPT ATLDVTETGS VPADQASGFD TATTADSKSF TVPYTLQTGK 180
  181 TRYAPMQMQP GTKVTATTWS MKFPTSAVTY YSTKAGTPNV ASTITPGWSY TAESAVNYAS 240
  241 VAPYPTYWYP ASERVSKATI SAATKRRRWL D

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	271	0.99