YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KRE1_CANAL
Protein type:	Transmembrane
Type Confidence:	0.66
Topology Confidence:	0.26
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVNSVIYYI LFLFASTILA ADKTSSSVSP TLVWVTGTDA NGKLATTQST YYQSFMSTYT  60
   61 TAETPSSGSI GLGSISGTVG EIRTYSMTTI SQGNGGLSKF NQNGLEMKNL SFVKLIGVSF 120
  121 IAFISFILLI

Type	Start	End	Confidence
Cytoplasmic	1	6	0.46
Transmembrane Helix	7	21	0.34
Non-Cytoplasmic	22	109	0.49
Transmembrane Helix	110	129	0.74
Cytoplasmic	130	130	0.26