YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KORC_METJA
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKRRVKMRK EIRLSGFGGQ GIILAGVILG RAAALYDNKE AVQTQSYGPE ARGGASKSEV  60
   61 VISDEPIDFP KVIKPDILVC LSQQAYDKYK DDIKEGGVVL VDEDLVSTDK MPEVDVTMYK 120
  121 IPFTRIASEE IKLPIVANIV MLGALTRLTN IVSKESMEKA ILDSVPKGTE EKNLLAFSKG 180
  181 YEVAKEL

Type	Start	End	Confidence
Cytoplasmic	1	13	0.73
Transmembrane Helix	14	35	0.72
Non-Cytoplasmic	36	187	0.97