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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|84232, gi|9909
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFKNKNTL RRKKAFPVFT KILLVSFLVW VLKCSNNCNN GNGSGDSFDF RNKRTLAQKQ  60
   61 HEHHHHHHHH HHHQHQAPHQ APHQAHHHHH HGEVNHQAPQ VHQQVHGQDQ AHHHHHHHHH 120
  121 HLHPQQPQGT VANPPSNEPV VKTQVFREAR PGGGFKAYEE KYESKHYKLK ENVVDGKKDC 180
  181 DEKYEAANYA FSEECPYTVN DYSQENGPNI FALRKRFPLG MNDEDEEGKE ALAIKDKLPG 240
  241 GLDEYQNQLY GICNETCTTC GPAAIDYVPA DAPNGYAYGG SAHDGSHGNL RGHDNKGSEG 300
  301 YGYEAPYNPG FNGAPGSNGM QNYVHPWSGY SAPYGVPHGA AHGSRYSSFS SVNKYGKHGD 360
  361 EKHHSSKKHE GNDGEGEKKK KSKKHKDHDG EKKKSKKHKD NEDAESVKSK KHKSHDCEKK 420
  421 KSKKHKDNED AESVKSKKVL KKREKSIMEK NHAAKKLTKK IKIKKKTNNS KSDGSKAHEK 480
  481 KENETKNTAG ENKKVDSTSA DNKSTNAATP GAKDKTQGGK TDKTGASTNA ATNKGQCAAE 540
  541 GATKGATKEA STSKEATKEA STSKEATKEA STSKEATKEA STSKGATKEA STTEGATKGA 600
  601 STTAGSTTGA TTGANAVQSK DETADKNAAN NGEQVMSRGQ AQLQEAGKKK KKRGCCG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle