YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KNH1_CANGA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSIILLLMQ LVAADIAVVG PSLDQSFDAS GGTAKIPIQW LFTPNTPSQD DFTSLTFSLC  60
   61 SGPNYKIEAF KVIGKLSDIG TTDFEAEVSQ SVGANGYYYV QIYAATTDGY TIHYSPRFKL 120
  121 TGMTGSKLPD TLLITAPPTP ETRVTTGDLG ATIDSKSFDI PYGEQNGKAK FAPMQTQPGT 180
  181 KITATTWSRR YATSAVSFFT SLTATPVQHT TLTPGWSYYI SSDYNYAPPA PFPSDNGGWY 240
  241 DPKKRQSFTT RKLNMDKLRK RRQTS

Type	Start	End	Confidence
Signal Peptide	1	14	0.93
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	265	0.98