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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KIRR1_RAT, KIR1_RAT
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLENRSTCL MTCQSSLLPK KPRFLSQKMW APHLVVAYLI FVTLALALPG TQTRFSQEPA  60
   61 DQTVVAGHRA VLPCVLLNYS GIVQWTKDGL ALGMGQGLKA WPRYRVVGSA DAGQYNLEIT 120
  121 DAELSDDASY ECQATEAALR SRRAKLTVLI PPEDTRIDGG PVILLQAGTP YNLTCRAFNA 180
  181 KPAATIIWFR DGTQQEGAVT STELLKDGKR ETTISQLLIQ PTDLDIGRVF TCRSMNEAIP 240
  241 NGKETSIELD VHHPPTVTLS IEPQTVLEGE RVIFTCQATA NPEILGYRWA KGGFLIEDAH 300
  301 ESRYETNVDY SFFTEPVSCE VDSKVGSTNV STVVNVHFAP RIVVYPKPTT TDIGSDVTLT 360
  361 CVWVGNPPLT LTWTKKDSNM VLSNSNQLLL KSVTQADAGT YTCRAIVPRI GVAEREVPLY 420
  421 VNGPPIISSE AVQFAVRGDG GKVECFIGST PPPDRIAWAW KENFLEVGTL ERYTVERTNS 480
  481 GSGVLSTLTI NNVMEADFQT HYNCTAWNSF GPGTAIIQLE EREVLPVGII AGATIGAGIL 540
  541 LVFSFAALVF FLYRRRKGSR KDVTLRKLDI KVETVNREPL TMHSDREDDT TSISTATRVM 600
  601 KAIYSSFKDD VDLKQDLHCD TIETREEYEM KDPTNGYYNV RAHEDRPSSR AVLYADYRAP 660
  661 GPTRFDGRPS SRLSHSSGYA QLNTYSRAPA SDYGTEPTPS GPSAPGGTDT TSQLSYENYE 720
  721 KFNSHPFPGA AGYPTYRLGY PQAPPSGLER TPYEAYDPIG KYATATRFSY TSQHSDYGQR 780
  781 FQQRMQTHV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle