YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KHSE_LISMO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRIRVPATTA NLGPGFDSCG LALTLYLTLD IGAEADSWYI EHNIGGGIPH DETNVIIETA  60
   61 LNLAPNLTPH HLVMTCDIPP ARGLGSSSAA VVAGIELANT LAELNLSKEE KVRIAAEIEG 120
  121 HPDNVAPAVL GNWVVGAKLD GEDFYVRHLF PDCALIAFIP KAELLTSESR GVLPDTLPFK 180
  181 EAVQASSIAN VMIAAILRND MTLAGEMMER DLWHEKYRSQ LVPHLAQIRD VAKNQGAYAA 240
  241 CLSGAGPTVL VFAPRNLANK LQTSLQTLEI DADVLLLDVE GSGAEVFR

Type	Start	End	Confidence
Signal Peptide	1	35	0.51
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	288	0.96