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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNN3_PIG
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSGHFHDS GVGDLDEDPK CPCPSSGDEQ QQQQPPPPPP PPAPPAAPQQ PPGPPLQPQP  60
   61 LQLQQQQQQQ QQQPPHPLSQ LAQLQSQPVH PGLLHSSPTA FRAPPSSNST AILHPSSRQG 120
  121 SQLNLNDHLL GHSPSSTATS GPGGGGRHRQ ASPLVHRRDS NPFTEIAMSS CKYSGGVMKP 180
  181 LSRLSASRRN LIEAEPEGQP LQLFSPSNPP EIIISSREDN HAHQTLLHHP NATHNHQHAG 240
  241 TTASSTTFPK ANKRKNQNIG YKLGHRRALF EKRKRLSDYA LIFGMFGIVV MVIETELSWG 300
  301 LYSKDSMFSL ALKCLISLST IILLGLIIAY HTREVQLFVI DNGADDWRIA MTYERILYIS 360
  361 LEMLVCAIHP IPGEYKFFWT ARLAFSYTPS RAEADVDIIL SIPMFLRLYL IARVMLLHSK 420
  421 LFTDASSRSI GALNKINFNT RFVMKTLMTI CPGTVLLVFS ISLWIIAAWT VRVCERYHDQ 480
  481 QDVTSNFLGA MWLISITFLS IGYGDMVPHT YCGKGVCLLT GIMGAGCTAL VVAVVARKLE 540
  541 LTKAEKHVHN FMMDTQLTKR IKNAAANVLR ETWLIYKHTK LLKKIDHAKV RKHQRKFLQA 600
  601 IHQLRSVKME QRKLSDQANT LVDLSKMQNV MYDLITELND RSEDLEKQIG SLESKLEHLT 660
  661 ASFNSLPLLI ADTLRQQQQQ LLSALMEARG VSVAVGTTHT PLSDSPIGVS STSFPTPYTS 720
  721 SSSC

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