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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNB2_RABIT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKAPPGLN RKTSRSTLSL PPEPVDIIKS KTCSRRVKIN VGGLNHEVLW RTLDRLPRTR  60
   61 LGKLRDCNTH ESLLEVCDDY NLGDNEYFFD RHPGAFTSIL NFYRTGKLHM MEEMCALSFG 120
  121 QELDYWGIDE IYLESCCQAR YHQKKEQMNE ELRREAETMR EREGEEFDNT CCPEKRKKLW 180
  181 DLLEKPNSSV AAKILAIVSI LFIVLSTIAL SLNTLPELQE TDEFGQPSDN PKLAHVEAVC 240
  241 IAWFTMEYLL RFLSSPNKWK FFKGPLNVID LLAILPYYVT IFLTESNKSV LQFQNVRRVV 300
  301 QIFRIMRILR ILKLARHSTG LQSLGFTLRR SYNELGLLIL FLAMGIMIFS SLVFFAEKDE 360
  361 DATKFTSIPA SFWWATITMT TVGYGDIYPK TLLGKIVGGL CCIAGVLVIA LPIPIIVNNF 420
  421 SEFYKEQKRQ EKAIKRREAL ERAKRNGSIV SMNLKDAFAR SMELIDVAVE KAGETANTKD 480
  481 SADDNHLSPS RWKWARKALS ESSSNKSYEN KYQEVSQKDS HEQLNNTSSS SPQHLSAQKL 540
  541 EMLYNEITKT QPHSHQAPDC QEQPERPSAY EEEIEMEEVV CPQEQLAVAQ TEVIVDMKST 600
  601 SSIDSFTSCA TDFTETERSP LPPPSASHLH MKFPTDFPGT EEHQRARGPP FLTLTREKGP 660
  661 AAREGALEYS PIDITVNLDA GSSQCGLHGP LQSDSATDSP KSSLKGSNPL KSRSLKVNFK 720
  721 ENRGSAPQTP PSTARPLPVT TADFSLSTPQ HISTILLEES PAQGDRLLLD AELPAQCQGL 780
  781 AKGLSPRFPK QKLFAFSSRE RRSFTEIDTG EDEDFLELQG ARADKQADSS PNCFAEKPSD 840
  841 ARHPLSEEGC GGSSSPPNTG HNCRQDSFHA VGEVQKDSSQ EGYKMENHLF APEIHSNPGD 900
  901 TGYCPTRETS M

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle