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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PFKA2_CANAX
Protein type: Globular with Signal Peptide
Type Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISIVNGTST LSLVAGSVET LNQAINFYTN ILGLSVHSEQ NDWTYLSNDD NKMIVKIQLD  60
   61 TKSGLSLDQV NDRRTEIIAK LNVTDWRSLD TTSVLKVQNL VALIETLTTF NYTLQITPNE 120
  121 LYPNEVYCVG PIGYIIGFTA CDEPLTLVPP LQKSHPKPGL VSNLMSKSGS QSRNIEETKA 180
  181 VRRNIAVMTS GGDSQGMNAA VRAVVRATIF HGSKAFAVQE GYAGLVKGGP EYIKEMKWQD 240
  241 VRGFLSEGGT NIGTARCMEF KERWGRLKGC KNLIDAGIDG LIVCGGDGSL TGADLFRHEW 300
  301 PSLIQELKDK GEITNEQFER HKHLYICGMV GSIDNDMAMT DATIGGYSAL ERICRAIDYI 360
  361 DATANSHSRA FVVEVMGRHC GWLALMAGIA TSADYIFIPE KPASSKDWQD QMCDIVGKHR 420
  421 AQGKRKTIVI VAEGAITSDL KPITSDEVKD VLVDRLGLDT RITVLGHVQR GGTAVAFDRT 480
  481 LATLQGVEAV KAILELTPDV PSPLIAIDEN KICRRPLVEA VRITKSVASA IEAKDFEKAM 540
  541 SLRDHEFKEH LANFMAMNTA NHEKPTLPRE KRKKIAIINI GAPAGGMNSA VYAMATYCMS 600
  601 RGHTPYAIHN GFAGLSRHES VKSIEWIDIE GWNSIGGSEI GTNRQTPEET DIGMIAHYFE 660
  661 KYQFDGLIIV GGFEAFVSLE QLERSRAMYP SFRIPMVLIP ATISNNVPGT EYSLGADTCL 720
  721 NSLMEYCDIV KQSASATRGT AFIIDVQGGN SGYIATFASL ISGAQASYVP EEGISLQQLE 780
  781 MDINSLREAF AVEQGMTKSG KLIIKSSNAS KVLTPHTLAD IFNDECHGDF DTKTAIPGHV 840
  841 QQGGLPSPID RSRGDRFAIR AVQFIEDHCD VLAPYRYELD FPIDDKKILN TAAVLGIKSS 900
  901 RLRFTSIRHL FDFETELGRR MPKTIYWNTI RDISDQLVGR TRLDKP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle