YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YCIB_VIBVY
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQILDFIPL IIFFALYKMY DIYVATGALI AATAIQIVVT YALYKKVEKM QLITFLMVAI  60
   61 FGGMTIFLHD DNFIKWKVTI VYAVFAIGLT VSHVMGKSAI KGMLGKEITL PESVWANINW 120
  121 AWVGFFTFCA GLNIYVAYQL PLDVWVNFKV FGLLAATLVF TVLTGGYIYK HLPKEQNGQS 180
  181 SDVPTDE

Type	Start	End	Confidence
Non-Cytoplasmic	1	21	0.86
Transmembrane Helix	22	43	0.93
Cytoplasmic	44	51	0.78
Transmembrane Helix	52	69	0.97
Non-Cytoplasmic	70	77	0.77
Transmembrane Helix	78	97	0.93
Cytoplasmic	98	117	0.83
Transmembrane Helix	118	138	0.94
Non-Cytoplasmic	139	147	0.78
Transmembrane Helix	148	169	0.91
Cytoplasmic	170	187	0.91