YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CG33470-PB, IM10-PB
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFGLIALA ICGVICVAAE PQHTYDGRNG PHVFGSPGNQ VYIRGQNEGT YSVPGVGGQF  60
   61 QNAPQRGEHV YTDEAGNTFV NRKNAGGPAS HTISGPNFSA KNLGPNGAKS VGIPQRARRS 120
  121 PQFHVERPGR TVDVGNGGFY IQRGRRSPQL HVARPDRTVT IGNGGVYIQR SRRSPQFHVE 180
  181 RPDRTVDFGN GGFSAQRFRR GINDARVQGE NFVARDDQAG IWDNNVSVWK RPDGRTVTID 240
  241 RNGHTIVSGR GRPAQHVSNL THLTSAIN

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	268	0.99