YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IL6_FELCA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFLSTSAFS PLAFSLGLLL VVATAFPTPG PLGGDATSNR LPLTSADKME ELIKYILGKI  60
   61 SALKKEMCDN YNKCEDSKEA LAENNLNLPK LAEKDGCFQS GFNQETCLTR ITTGLQEFQI 120
  121 YLKFLQDKYE GDEENAKSVY TSTNVLLQML KRKGKNQDEV TIPVPTVEVG LQAKLQSQEE 180
  181 WLRHTTIHLT LRRLEDFLQF SLRAVRIM

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	208	0.98