YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IBP2A_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSYVSCGLL LALVTFHGTA RSEMVFRCPS CTAERQAACP MLTETCGEIV REPGCGCCPV  60
   61 CARQEGEQCG VYTPRCSSGL RCYPKPDSEL PLELLVQGLG RCGRKVDTEP TGSAEPREVS 120
  121 GEVQDPLDIG LTEVPPIRKP TKDSPWKESA VLQHRQQLKS KMKYHKVEDP KAPHAKQSQC 180
  181 QQELDQVLER ISKITFKDNR TPLEDLYSLH IPNCDKRGQY NLKQCKMSVN GYRGECWCVN 240
  241 PHTGRPMPTS PLIRGDPNCN QYLDGQEMDP SVDPPN

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	276	0.99