YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HXB7_BOVIN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLYYANAL FSKYPAASSV FATGAFPEQT SCAFASNPQR PGYGAGSGAS FAASMQGLYP  60
   61 GGGGMAGQSA AGVYAAGYGL EPSSFNMHCA PFEQNLSGVC PGDSAKAAGA KEQRDSDLAA 120
  121 ESNFRIYPWM RSSGTDRKRG RQTYTRYQTL ELEKEFHYNR YLTRRRRIEI AHALCLTERQ 180
  181 IKIWFQNRRM KWKKENKTSG PGTTGQDRAE AEEDEEE

Type	Start	End	Confidence
Signal Peptide	1	35	0.72
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	217	0.97