YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HSP6_HETGL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRRFTVFLV IALVTSIYEV LSNGNLNDGD DSFKQFDELE ENPAHKYSKE AQKGFEMEEE  60
   61 EVTIREPSGT KESFKLPINM PPVKFSFCVS CGYRQAYEQF AQILREKYPG IDIHGENYPP 120
  121 GILRTVGAQV IGMVKIALIV CVVSGRSPFP TLGLETPTFF QWMLSNRLSA ALMLFLFSNA 180
  181 IEGMLQSTGA FEIYIESERI WSKLESGRVP SPPELFQAID SHLAIRRGGA GRFGSSSSFG 240
  241 IDGS

Type	Start	End	Confidence
Signal Peptide	1	22	0.76
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	244	0.80