YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HS22C_PETHY
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MACKTLTCSA SPLVSNGVVS ATSRTNNKKT TTAPFSVCFP YSKCSVRKPA SRLVAQATGD  60
   61 NKDTSVDVHV SNNNQGGNNQ GSAVERRPRR MALDVSPFGL LDPMSPMRTM RQMMDTMDRL 120
  121 FEDTMTFPGS RNRGTGEIRA PWDIKDDENE IKMRFDMPGL SKEEVKVSVE DDVLVIKGEH 180
  181 KKEESGKDDS WGRNYSSYDT RLSLPDNVDK DKVKAELKNG VLLISIPKTK VEKKVTDVEI 240
  241 K

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	241	0.99