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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: VM3HA_PROFL
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIQVLLVTIC LAVFPYQGSS IILGSGNVND YEVVYPRKVT AVPKGAVQPK YEDTMQYEFK  60
   61 VNGEPVVLHL EKNKGLFSKD YSETHYSPDG REITTYPSVE DHCYYHGRIQ NDADSTASIS 120
  121 ACNGLKGHFK LQGEMYLIEP LRFSDSEAHA VFKYENVEKE DEAPKMCGVT QTNWESDEPI 180
  181 KKASKLVVTA EQQRYLNNFR FIELVIVADY RMFTKFNSNL NEVKTWVYEI VNTLNEIYRY 240
  241 LYVRVALVAL EVWSNGDLSS VTLSAYDTLD SFGEWRKRDL LKRKSHDNAQ LLTAIDFNGT 300
  301 IIGLAHVASM CDPKCSTGIV QDYSSRNLVV AVIMAHEMGH NLGIRHDREN CTCHANSCIM 360
  361 SAVISDQPSK YFSNCSHVQY WNYINDDEPQ CILNEPLRTD IVSPPVCGNE LLEVGEECDC 420
  421 GSPATCRYPC CDAATCKLHS WVECESGECC EQCRFRTAGT ECRARRSECD IAESCTGHSA 480
  481 DCPTDRFHRN GQPCLHNFGY CYNGNCPIMY HQCYALWGAN ATVAKDSCFE DNQKGNDYGY 540
  541 CRKENGRKIP CEPQDVKCGR LYCSLGNQLP CRFFYTPTDE NIGMVDTGTK CGDKKVCSNR 600
  601 QCVDVNTAY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle