YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|186495126
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILQWGEDR RFDEQRGNIV RLIIFWTLQA VWVWTVSLPL TLVNASDGGG SLKPADVIGW  60
   61 TMWVFGFLIE AAADQQKLSF KNSPENRGKW CDVGVWKYSR HPNYFGEMLL WWGIFVAASP 120
  121 VLEGAEYLVI FGPLFLTLLL LFVSGIPLLE ASADKKHGNS GAYRSYKKTT SPLILFPRGV 180
  181 YGNLPGWFKT VFLFEFPFYS RNLPQEKVRV DSKTAKRKK

Type	Start	End	Confidence
Cytoplasmic	1	18	0.96
Transmembrane Helix	19	38	0.93
Non-Cytoplasmic	39	56	0.73
Transmembrane Helix	57	73	0.86
Cytoplasmic	74	103	0.85
Transmembrane Helix	104	122	0.86
Non-Cytoplasmic	123	128	0.68
Transmembrane Helix	129	149	0.91
Cytoplasmic	150	219	0.75