YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEMH_THEEB
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASQTGVLLL NLGGPDRPED VRPFLYNLFS DPEIIRLPFR WLQKPLAWFI STSRARRSQA  60
   61 NYAQIGGGSP LRRITEQQAR ALKDALEGIG IEANLYIGMR YWHPFTEEAI AQIKADQIRE 120
  121 LVILPLYPQF SISTSGSSFR LLESLWNQDP ELQKIRYTLI PSWYNHPGYV AAMADLIRQE 180
  181 LDRCPNPDEA VIFFSAHGVP KSYVTEAGDP YQEEIEACVR LIMAALNRPN AHVLAYQSRV 240
  241 GPVEWLQPYT EDVILELAAQ GVKTLVVVPI SFVSEHIETL QEIDIEYREI AAEAGIEVFR 300
  301 RVPALNDHNG FISALAQLVK EALAAPPRTF AEVNQSRKRV KLYPQERWEW GMTSAAERWN 360
  361 GRLAMLGFLA LMIELISGQG PLHMLGLL

Type	Start	End	Confidence
Cytoplasmic	1	358	0.76
Transmembrane Helix	359	382	0.71
Non-Cytoplasmic	383	388	0.78