YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HEM6_SOYBN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMHCASIVSA PSYAFPFRSG SASTTPTAIS LTKRSWKPPP SMAKGPVRAT VSIEKETPEA  60
   61 NRPETFLRGV DEAQSSTSVR ARFEKMIREA QDTVCSALEA ADGGAQFKED VWSRPGGGGG 120
  121 ISRVLQDGAV WEKAGVNVSV VYGVMPPDAY RAAKGVPTDQ KPGPVPFFAA GISSVLHPKN 180
  181 PFAPTLHFNY RYFETDAPKD APGAPRQWWF GGGTDLTPAY IFEEDVKHFH SIQKQACDKF 240
  241 EPTFYPRFKK WCDDYFYIKH RGERRGLGGI FFDDLNDYDQ EMLLSFATEC ANSVIPAYLP 300
  301 IIEKRKDLPF NDHQKAWQQL RRGRYVEFNL VYDRGTTFGL KTGGRIESIL VSLPLTARWE 360
  361 YDHKPEEGSE EWKLLDACIN PKEWI

Type	Start	End	Confidence
Signal Peptide	1	14	0.58
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	385	0.99