YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|84320100
Protein type:	Transmembrane
Type Confidence:	0.90
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRRQQSGFT LIEIMVVVVI LGILAALVVP QVMSRPDQAK VTVAKGDIKA IAAALDMYKL  60
   61 DNFAYPSTQQ GLEALVKKPT GNPQPKNWNK DGYLKKLPVD PWGNPYQYLA PGTKGPFDLY 120
  121 SLGADGKEGG SDNDADIGNW DN

Type	Start	End	Confidence
Cytoplasmic	1	8	0.79
Transmembrane Helix	9	29	0.86
Non-Cytoplasmic	30	142	0.95