YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227576, gi\|96552
Protein type:	Transmembrane
Type Confidence:	0.74
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRQRGFTLL EIMVVIVILG VLASLVVPNL MGNKEKADRQ KVVSDLVALE GALDMYKLDN  60
   61 SRYPTTEQGL QALVSAPSAE PHARNYPEGG YIRRLPQDPW GSDYQLLSPG QHGQVDIFSL 120
  121 GPDGVPESND DIGNWTIGKK

Type	Start	End	Confidence
Cytoplasmic	1	6	0.44
Transmembrane Helix	7	31	0.63
Non-Cytoplasmic	32	140	0.71