YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSPG_PECCC
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQSQRGCGQ NSYGQSGYRQ RGFTLLEIMV VIVILGVLAS LVVPNLMGNK EKADRQKAVS  60
   61 DIVSLESALD MYKLDNNRYP STEQGLKALV TKPTVQPEPR NYPADGYIRR LPQDPWGTDY 120
  121 QLLNPGQHGK LDIFSLGPDG MPGTEDDIGN WNLDKK

Type	Start	End	Confidence
Non-Cytoplasmic	1	22	0.63
Transmembrane Helix	23	47	0.84
Cytoplasmic	48	156	0.62