YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GSPG_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRATDKQRGF TLLEIMVVIV IIGVLASLVV PNLMGNKEKA DKQKAVSDIV ALENALDMYK  60
   61 LDNHHYPTTN QGLESLVEAP TLPPLAANYN KEGYIKRLPA DPWGNDYVLV NPGEHGAYDL 120
  121 LSAGPDGEMG TEDDITNWGL SKKKK

Type	Start	End	Confidence
Cytoplasmic	1	9	0.71
Transmembrane Helix	10	30	0.87
Non-Cytoplasmic	31	145	0.80