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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GSPD_ECOLI
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGLNKITCC LLAALLMPCA GHAENEQYGA NFNNADIRQF VEIVGQHLGK TILIDPSVQG  60
   61 TISVRSNDTF SQQEYYQFFL SILDLYGYSV ITLDNGFLKV VRSANVKTSP GMIADSSRPG 120
  121 VGDELVTRIV PLENVPARDL APLLRQMMDA GSVGNVVHYE PSNVLILTGR ASTINKLIEV 180
  181 IKRVDVIGTE KQQIIHLEYA SAEDLAEILN QLISESHGKS QMPALLSAKI VADKRTNSLI 240
  241 ISGPEKARQR ITSLLKSLDV EESEEGNTRV YYLKYAKATN LVEVLTGVSE KLKDEKGNAR 300
  301 KPSSSGAMDN VAITADEQTN SLVITADQSV QEKLATVIAR LDIRRAQVLV EAIIVEVQDG 360
  361 NGLNLGVQWA NKNVGAQQFT NTGLPIFNAA QGVADYKKNG GITSANPAWD MFSAYNGMAA 420
  421 GFFNGDWGVL LTALASNNKN DILATPSIVT LDNKLASFNV GQDVPVLSGS QTTSGDNVFN 480
  481 TVERKTVGTK LKVTPQVNEG DAVLLEIEQE VSSVDSSSNS TLGPTFNTRT IQNAVLVKTG 540
  541 ETVVLGGLLD DFSKEQVSKV PLLGDIPLVG QLFRYTSTER AKRNLMVFIR PTIIRDDDVY 600
  601 RSLSKEKYTR YRQEQQQRID GKSKALVGSE DLPVLDENTF NSHAPAPSSR 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle