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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GSPA_ECOLI
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTRREVILS WLCEKRQTWR LCYLLGEAGS GKTWLAQQLQ KDKHRRVITL SLVVSWQGKA  60
   61 AWIVTDDNAA EQGCRDSAWT RDEMAGQLLH ALHRTDSRCP LIIIENAHLN HRRILDDLQR 120
  121 AISLIPDGQF LLIGRPDRKV ERDFKKQGIE LVSIGRLTEH ELKASILEGQ NIDQPDLLLT 180
  181 ARVLKRIALL CRGDRRKLAL AGETIRLLQQ AEQTSVFTAK QWRMIYRILG DNRPRKMQLA 240
  241 VVMSGTIIAL TCGWLLLSSF TATLPVPAWL IPVTPVVKQD MTKDIAHVVM RDSEALSVLY 300
  301 GVWGYEVPAD SAWCDQAVRA GLACKSGNAS LQTLVDQNLP WIASLKVGDK KLPVVVVRVG 360
  361 EASVDVLVGQ QTWTLTHKWF ESVWTGDYLL LWKMSPEGES TITRDSSEEE ILWLETMLNR 420
  421 ALHISTEPSA EWRPLLVEKI KQFQKSHHLK TDGVVGFSTL VHLWQVAGES AYLYRDEANI 480
  481 SPETTVKGK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle