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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GSPA_AERHY
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYTQFFGLSE PPFSISPNPK YLYMSERHGE ALAHLNYGLQ DGGGFVLLTG EVGTGKTTVS  60
   61 RCLLQQLPTE TEIAYILNPS LTERDLLAAI CDEFQLPYDK DAGLKLLFDL IRDHLLANLA 120
  121 AGKRSVVLVD EAQHLLPGVL EQLRLLTNLE TDEKKLLQVV LIGQPELQQM LRQPLLRQLA 180
  181 QRITARYHLL PLSHQDVDAY VRFRLQVAGC VQPIFTPKAL QTLHRLSGGI PRLINLICDR 240
  241 ALIAAFARGS HKIVHGDISL AAYEVSGIRD EGTWQSGLMV ALAGALLVAT GWWGWQFFGF 300
  301 FPERPVIKVE VPVKVDDTPE QQEQLTRAIN QALEPDSAMQ NLYKVWGYQT ELEEATCDNA 360
  361 PRAGLRCQEG DASLAELQAL QHPALISLTD ETGGIYYATL VNLGPDKANL LIGNQSWQVD 420
  421 RQWLSDFWGG SYTLLWRMPK GGVALIGNNA GATQVQWLDN ALSRALQQPD RKVRRFDAEL 480
  481 KNKLQQFQRE QGLNPDGIAG SNTLLRLNVM AGEPMPKLED ESQRASTPAT PDTMNDEPMV 540
  541 TLSEEAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle