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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|229193019, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWNWLRKKK KSNTSKLNET DNQEQHSNNQ EDDNKEQTRS MKHNKGKNNE QKDSSQDKQQ  60
   61 SAKQGDSSQD KQQNPKQEDS SQDKQQNPKQ GDSSQDKQQS AKQKDPSQDK QQNPKQEDSS 120
  121 QDKQQSAKQG DSSQDKQQSA KQGDSSQDKQ QNAKQDEPSQ SKQQSSGGNS IYDFTKPEKD 180
  181 RIHSLQNLIE KLKKSSDFVN YHTSDDETMP YWISYYRPSL DGEKLQKYLM PTLLERPNAS 240
  241 LEELKEHIPM SGITITNDLQ KIEDMVLKGH AIIQLNQQDQ KCMLANIAID NYRAPTPPLN 300
  301 ESTVIGPQEG FVEDIDTNIN LVRKRLPVLD LQTKEMIIGE FSKTKVVMMY LDNLAEKDNV 360
  361 DFLEESLRAL EYDQINDSAY LQELMGEKSI FPLYINTERT DRVTKALIDG KIAIFVDGSP 420
  421 SVLLTPVSYF DFFISPEDYN VSWMYATFSR ILRLIAVLFS ICATPLYVAV LNYHYELIPS 480
  481 DLLETLILSR AQVPFPPLIE ALFLELAIDL LREAGARLPM KVGQTLGIVG GIVIGQASVQ 540
  541 AGLTSNILLI IVALSALASF ITPIYKMGNA VRLLRFPFLA FAEIGGLFGI SLGFIFLFTH 600
  601 LFRLTSLRKP YALFYPTRQQ SVKDSWIRFP LTMIDTRDVQ ARPQHVKKAA KGISTKHRSD 660
  661 FDD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle