YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_STAA9
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKITVFGMG SFGTALANVL AENGHDVLMW GKNQDAVDEL NTCHTNKKYL KYAKLDVNII  60
   61 ATSDMTKAIQ FADIYLMALP TKAMREVATQ INDKLTSKKT FIHVAKGIEN GTFKRVSEMI 120
  121 EDSISPEYNA GIGVLSGPSH AEEVVVKQPT TVAASSKDKS VSKLTQDLFM NDYLRVYTND 180
  181 DLIGVELGGA LKNIIAVASG IVAGIGYGDN AKAALMTRGL AEISRLGEKL GADPMTFLGL 240
  241 GGIGDLIVTC ISTHSRNFTL GYKLGQGESM DQALSEMNMV VEGIYTTKSV YHLAKEKNVD 300
  301 MPITNALYRV LFENISVKEC VKDLMERDKK SE

Type	Start	End	Confidence
Signal Peptide	1	21	0.95
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	332	0.98