YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_SHEON
Protein type:	Globular with Signal Peptide
Type Confidence:	0.36
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNSADITVL GAGSYGTALA ISLASNGHKT LLWGHDPAHM QTLAEDKCNQ AFLPGIAFPE  60
   61 CLHIEADLAK ALAASNNVLV VVPSHVFGTV LAQAKPLLRQ DARIVWATKG LEPETGRLLQ 120
  121 DVARDVLGEQ YPLAVLSGPT FAKELAMGLP TAISVAGTCP QFTAELVELL HSPKRLRVYA 180
  181 NDDFIGLQLG GAVKNVIAIG AGMSDGIGFG ANARTALITR GLVELTRLGE ALGASTATFM 240
  241 GMAGLGDLVL TCTDNQSRNR RFGLALGKGC DVDTAQVEIG QVVEGYRNTK EVFTLAKRLG 300
  301 VEMPITEQIY QVLYQGKSPV DAAKELLGRE KKSETPTQ

Type	Start	End	Confidence
Signal Peptide	1	20	0.40
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	338	0.80