YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_PHOLL
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSTVSMTVI GAGSYGTSLA ITLARNGHNV VLWGHNPEHV GALQRVRCNQ KFLPDVSFPD  60
   61 SLLLETDLIK ALTASRDILV VVPSHVFGEV LKQIKPHLRP DSRIVWATKG LEADTGRLLQ 120
  121 DVAREILGNE IPLAVLSGPT FAKELAAGLP TAIAISATES AFGDGLQQLF HCGKSFRVYK 180
  181 NPDFIGVQLG GAVKNVIAIG AGISDGMGFG ANARTALITR GLAEMSRLGA ALGADPSTFM 240
  241 GMAGLGDLVL TCTDNQSRNR RFGMMLGQGI SVEEAQYQIG QVVEGYRNTK EVRALANRAN 300
  301 VEMPIAEQIY QILYCNKNVI EAAQALLGRA RKDESDNVRS

Type	Start	End	Confidence
Signal Peptide	1	20	0.63
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	340	0.94