YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|227073624, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQKVAVLGP GSWGTALAQV LAENGHEVCI WGNKPEQIDE INTKHTNKHY LPELILPTSI  60
   61 QATTDLATAL VDVDAVLFVV PTKAIRSVAQ EVAQHLKTKP IIIHASKGLE QGTHKRISEV 120
  121 IAEEIPAEKR QGIVVLSGPS HAEEVAVHDI TTITAASENL ADAVYVQELF MNDYFRIYTN 180
  181 DDVIGVETGA ALKNIIALGA GAIHGLGFGD NAKAAIMTRG LAEISRLGVA MGANPLTFIG 240
  241 LSGVGDLIVT CTSVHSRNWR AGNLLGKGHK LDEVLENMGM IVEGVSTTKA AYELAQQLEV 300
  301 EMPITETIYN VLYNDEDVQQ AAKEIMLRDG KTENEFTLDF

Type	Start	End	Confidence
Signal Peptide	1	22	0.91
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	340	0.97