YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_DESVH
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIAVLGGGS WGTALAHLLA GKGEDVRLWV RDPAVVEGVN RDHENPRYLK GLHLHEALRA  60
   61 TCDAGEALEG ADILLSVVPC QQTRTVLRSL RPRLKTGMVV VSASKGIETD GLRTVGEMVE 120
  121 DELAGLAPRY AVISGPSFAA EVVAGMPTAV VLGCADRDLG GTLREVFSTP TFRTYSCTDV 180
  181 RGVELGGAVK NVIAIAAGLS DGLGFGSNAR AGLITRGLAE MGRLGVALGA RGSTFMGLSG 240
  241 LGDLVLTCTG DLSRNRQVGL RLAEGQGLDA IVAGMGMVAE GVKTTEAVYE LAQREGVDLP 300
  301 ITQAMYAVLH DGRDPRDMVQ ELMTRELREE

Type	Start	End	Confidence
Signal Peptide	1	16	0.94
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	330	0.98