YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GPDA_BACHD
Protein type:	Globular with Signal Peptide
Type Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNVAVIGAG SWGTALSLVL ADNGHHVTLV ARREEIAREI NERHTNETYL PSIEIPSSIV  60
   61 ATCSMEEIID VEIIVLVVPT KAIRQAVRSL NDVLKWPVTI VHASKGIEPG SHLRISEMIE 120
  121 EELEPTLLKE VVVLSGPSHA EEVSLRQPTT VTVSSKSLST TKQIQDLFMN QQFRVYTNED 180
  181 LIGVEIGGAL KNIIALACGL TNGLGYGDNT KAAIMTRGLA EIGRLGVKLG ASPLTFAGLS 240
  241 GLGDLIVTCT SIHSRNWRAG QMLGKGKSPA EVEESMGMVV EGIRTTQAAH ELAQKLQIEM 300
  301 PITSALYSVL FEGKKPEHAA DELMGRVKKH EMENLHDVVS DQKND

Type	Start	End	Confidence
Signal Peptide	1	21	0.98
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	345	0.97