YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30261600, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKITVVGAG SWGTALAMVL ADNGHDVRIW GNRSELMDEI NTKHENSRYL PGITLPSTIV  60
   61 AYSSLEEALV DVNVVLIVVP TKAYREVLQD MKKYVAGPTT WIHASKGIEP GTSKRISEVI 120
  121 EEEIPEDLIK DVVVLSGPSH AEEVGLRQAT TVTSAAKRME AAEEVQDLFM NSYFRVYTNP 180
  181 DIVGVELGGA LKNIIALAAG ITDGLGLGDN AKAALMTRGL TEIARLGRKM GGNPLTFAGL 240
  241 TGMGDLIVTC TSVHSRNWRA GNMLGKGHSL EEVLESMGMV VEGVRTTKAA HELAEKMEVE 300
  301 MPITAALYDV LFNGNNVKDA VGSLMGRVRK HEVEAIPDLL

Type	Start	End	Confidence
Signal Peptide	1	21	0.96
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	340	0.99