YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	P2Y13_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLGTINTTGM QGFNKSERCP RDTRMTQLLF PVLYTVVFLA GILLNTVALW VFVHIPSNST  60
   61 FIVYLKNTLV ADLIMALMLP FKILSDSHLA PWQLRGFVCT LSSVVFYETM YVGIMMLGLI 120
  121 AFDRFLKIIM PFRKTFVKKT AFAKTVSISV WSLMFFISLP NMILNKEATP SSVKKCASLK 180
  181 SPLGLWWHQV VSHTCQFIFW AVFILMLLFY AVITKKVYNS YRKFRSKDSR HKRLEVKVFI 240
  241 VMAVFFVCFA PLHFVRIPYT YSQTTNKTDC RLENQLFIAK EATLFLATTN ICMDPLIYII 300
  301 LCKKFTQKVP CVRWGKARTA GSSEDHHSSQ TDNITLA

Type	Start	End	Confidence
Non-Cytoplasmic	1	29	0.53
Transmembrane Helix	30	53	0.90
Cytoplasmic	54	62	0.45
Transmembrane Helix	63	83	0.53
Non-Cytoplasmic	84	103	0.77
Transmembrane Helix	104	122	0.90
Cytoplasmic	123	140	0.83
Transmembrane Helix	141	163	0.86
Non-Cytoplasmic	164	192	0.96
Transmembrane Helix	193	214	0.91
Cytoplasmic	215	233	0.95
Transmembrane Helix	234	255	0.93
Non-Cytoplasmic	256	337	0.75