YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GNTX_ECOLI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTVPGLCWL CRMPLALGHW GICSVCSRAT RTDKTLCPQC GLPATHSHLP CGRCLQKPPP  60
   61 WQRLVTVADY APPLSPLIHQ LKFSRRSEIA SALSRLLLLE VLHARRTTGL QLPDRIVSVP 120
  121 LWQRRHWRRG FNQSDLLCQP LSRWLHCQWD SEAVTRTRAT ATQHFLSARL RKRNLKNAFR 180
  181 LELPVQGRHM VIVDDVVTTG STVAEIAQLL LRNGAAAVQV WCLCRTL

Type	Start	End	Confidence
Signal Peptide	1	18	0.79
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	227	0.98