YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLVG_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.52
Topology Confidence:	0.26
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKFSVVVAG GGSTFTPGIV LMLLANQDRF PLRALKFYDN DGARQEVIAE ACKVILKEKA  60
   61 PDIAFSYTTD PEVAFSDVDF VMAHIRVGKY PMRELDEKIP LRHGVVGQET CGPGGIAYGM 120
  121 RSIGGVLELV DYMEKYSPNA WMLNYSNPAA IVAEATRRLR PNAKILNICD MPIGIESRMA 180
  181 QIVGLQDRKQ MRVRYYGLNH WWSAISRSFR KG

Type	Start	End	Confidence
Cytoplasmic	1	5	0.26
Transmembrane Helix	6	25	0.50
Non-Cytoplasmic	26	212	0.76