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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: pgant2-PA, FBpp0...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRNIKLIVF VSIIWMFVMV YYFQSSTEKV ENRALRLREV ATAMQQYQDD SSSAAAASTA  60
   61 RQWAPAGGGA GPGAAAGAAG SGADDPGGNV ILIGSVKDFE RNAVHGLKLN GIVALEETSQ 120
  121 GLSGGTGGPG GRLPVAPSGR GTEVEYFNEA GYIRAGALRN GEDPYIRNRF NQEASDALPS 180
  181 NRDIPDTRNP MCRTKKYRED LPETSVIITF HNEARSTLLR TIVSVLNRSP EHLIREIVLV 240
  241 DDYSDHPEDG LELAKIDKVR VIRNDKREGL VRSRVKGADA AVSSVLTFLD SHVECNEMWL 300
  301 EPLLERVRED PTRVVCPVID VISMDNFQYI GASADLRGGF DWNLIFKWEY LSPSERAMRH 360
  361 NDPTTAIRTP MIAGGLFVID KAYFNKLGKY DMKMDVWGGE NLEISFRVWQ CGGSLEIIPC 420
  421 SRVGHVFRKR HPYTFPGGSG NVFARNTRRA AEVWMDDYKQ HYYNAVPLAK NIPFGNIDDR 480
  481 LALKEKLHCK PFKWYLENVY PDLQAPDPQE VGQFRQDSTE CLDTMGHLID GTVGIFPCHN 540
  541 TGGNQEWAFT KRGEIKHDDL CLTLVTFARG SQVVLKACDD SENQRWIMRE GGLVRHYKIN 600
  601 VCLDSRDQSQ QGVSAQHCNS ALGTQRWSFG KYA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle