YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	GLCU_BACCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.59
Transmembrane Helix	5	25	0.85
Cytoplasmic	26	31	0.51
Transmembrane Helix	32	50	0.73
Non-Cytoplasmic	51	53	0.61
Transmembrane Helix	54	72	0.89
Cytoplasmic	73	87	0.77
Transmembrane Helix	88	108	0.88
Non-Cytoplasmic	109	114	0.75
Transmembrane Helix	115	136	0.92
Cytoplasmic	137	152	0.89
Transmembrane Helix	153	171	0.96
Non-Cytoplasmic	172	180	0.68
Transmembrane Helix	181	198	0.97
Cytoplasmic	199	205	0.85
Transmembrane Helix	206	226	0.91
Non-Cytoplasmic	227	233	0.75
Transmembrane Helix	234	256	0.90
Cytoplasmic	257	263	0.93
Transmembrane Helix	264	284	0.95
Non-Cytoplasmic	285	286	0.91

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDIFLAILP AIFWGSIVLF NVKLGGGPYS QTLGTTFGAL IFSIVVYIFM KPVLTPTVIG  60
   61 VGVVSGLFWA LGQANQLKSI DLMGVSRTMP ISTGLQLVAT TLFGVIVFHE WSTTISVVLG 120
  121 ILALVCIIIG VILTSLQSEE EKNAEQAANF KRGIVILLIS TVGYLVYVVV IRLFNVDGWS 180
  181 ALLPQAVGMV LGGILLTFKH HPFNKYAIRN IIPGLIWAAG NMFLFISQPR VGVATSFSLS 240
  241 QMGIIISTLG GILILGEKKT KRQLTGIVVG IVFIIAAGIM LGIAKS