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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29139576, gi|...
Protein type: Transmembrane
Type Confidence: 0.61
Topology Confidence: 0.54
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFYQDPFDVI IIGGGHAGTE AAMAAARMGQ QTLLLTHNID TLGQMSCNPT IGGIGKGHLV  60
   61 KEVDALGGLM AKAIDQAGIQ FKILNASKGP AVRATRAQAD RVLYRQAVRI ALENQPNLMI 120
  121 FQQAVEDLIV ENDRVVGAVT QMGLKFRAKA VVLTVGTFLD GKIHIGLDNY SGGRAGDPPS 180
  181 IPLSRRLREL PLRVSRLKTG TPPRIDARTI DFSVLAQQHG DNPMPVFSFM GNAFQHPQQV 240
  241 PCYITHTNEK THDVIRNNLD RSPMYAGVIE GIGPRYCPSI EDKVMRFADR NQHQIFLEPE 300
  301 GLTSNEIYPN GISTSLPFDV QMQIVRSMQG MENAKIVRPG YAIEYDFFDP RDLKPTLESK 360
  361 FIHGLFFAGQ INGTTGYEEA AAQGLLAGLN AARLSADKEG WAPARSQAYL GVLVDDLCTL 420
  421 GTKEPYRMFT SRAEYRLMLR EDNADLRLTE MGRELGLVDD ERWARFNEKL ENIERERQRL 480
  481 KSTWVTPSAE SADEVNAHLT TPLSREASGE DLLRRPEMTY AQLTSLAAFA PALEDEQAAE 540
  541 QVEIQVKYEG YIARQQDEIE KQLRNENTLL PATLDYRQVS GLSNEVIAKL NDHKPASIGQ 600
  601 ASRISGVTPA AISILLVWLK KQGMLRRSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle