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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GHR_PIG
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWQLLLTL AVAGSSDAFS GSEATPAVLV RASQSLQRVH PGLETNSSGK PKFTKCRSPE  60
   61 LETFSCHWTD GVRHGLQSPG SIQLFYIRRS TQEWTQEWKE CPDYVSAGEN SCYFNSSYTS 120
  121 IWIPYCIKLT SNGGTVDQKC FSVEEIVQPD PPIGLNWTLL NISLTGIHAD IQVRWEPPPN 180
  181 ADVQKGWIVL EYELQYKEVN ETQWKMMDPV LSTSVPVYSL RLDKEYEVRV RSRQRNSEKY 240
  241 GEFSEVLYVT LPQMSPFACE EDFRFPWFLI IIFGIFGLTV ILFLLIFSKQ QRIKMLILPP 300
  301 VPVPKIKGID PDLLKEGKLE EVNTILAIHD NYKHEFYSDD SWVEFIELDI DDPDEKTEGS 360
  361 DTDRLLNNDH EKSLTILGAK EDDSGRTSCY EPDILETDFN ANDVCDGTAE VAQPQRLKGE 420
  421 ADLLCLDQKN QNNSPSNDAA PATQQPSVIL AEENKPRPLI ISGTDSTHQT AHTQLSNPSS 480
  481 LANIDFYAQV SDITPAGSVV LSPGQKNKAG ISQCDMHLEV VSPCPANFIM DNAYFCEADA 540
  541 KKCIAMAPHV EVESRLAPSF NQEDIYITTE SLTTTAGRSA TAECAPSSEM PVPDYTSIHI 600
  601 VQSPQGLVLN ATALPLPDKE FLSSCGYVST DQLNKIMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle