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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GHR_PAPAN
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWQLLLTL ALAGSSDAFS GSEPTAAILS RASWSLQSVN PGLKTNSSKE PKFTKCRSPE  60
   61 RETFSCHWTD AVHHGSKSLG PIQLFYTRRN IQEWTQEWKE CPDYVSAGEN SCYFNSSFTS 120
  121 VWIPYCIKLT SNGDTVDGKC FSVDEIVQPD PPIALNWTLL NVSLTGIHAD IQVRWEAPPN 180
  181 ADIQKGWMVL EYELQYKEVN ETKWKMMDPI LSTSVPVYSL KVDKEYEVRV RSKRRNSGNY 240
  241 GEFSEVLYVT LPQMNQFTCE EDFYFPWLLI IIFGIFGLTV MLFVFLFSKQ QRIKMLILPP 300
  301 VPVPKIKGID PDLLKEGKLE EVNTILAIHD SYKPEFHSDD SWVEFIELDI DEPDEKNEGS 360
  361 DTDRLLSSDH QKSHSNLGVK DGDSGRTSCY EPDILETDFN ANNIHEGTSE VAQPQRLKGE 420
  421 ADLLCLDQKN QNKSPYHDAC PAAQQSSVIQ AEKNKPQPLP TDGAESTHQA AHIQLSNPSS 480
  481 LANIDFYAQV SDITPAGSVV LSPGQKNKAG MSQCDMHLEM VSLCQEDFIM DNAYFCEADA 540
  541 KKCIPVAPHI KVESHIEPSF NQEDIYITTE SLTTTAGRPG TTEHIPGSEM PVPDYTSIHI 600
  601 VQSPQGLILN ATALPLPGKE FLSSCGYVST DQLNKIMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle