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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GHR_CANLF
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLWQLLLTL AVAGSGSAFS GSEATPTILG SASQSLQRVN PGLGTNSSEK PKFTKCRSPE  60
   61 LETFSCHWTD GVRHGLKNAG SVQLFYIRRS TQEWTQEWKE CPDYVSAGEN SCYFNSSYTS 120
  121 IWIPYCIKLT SNGGTVDQKC FSVEEIVQPD PPIGLNWTLL NISLTGIHAD IQVRWEPPPN 180
  181 ADVQKGWIVL KYELQYKEVN ESQWKMMDPV SATSVPVYSL RLDKEYEVRV RSRQRNSEKY 240
  241 GEFSEALYVT LPQMSPFACE EDFQFPWFLI IIFGIFGLTM ILFLFIFSKQ QRIKMLILPP 300
  301 VPVPKIKGID PDLLKEGKLE EVNTILAIHD NYKPEFYNDD SWVEFIELDI DDLDEKTEGS 360
  361 DTDRLLSNDH EKSLNILGAK DDDSGRTSCY EPDILETDFN ASDVCDGTSE VAQPQRLKGE 420
  421 VDLLCLDQKN QNNSPSTDTT PTTQQPSIIL AKENKPRPLL ISGTESTQQA AHTQLSNPSS 480
  481 LANIDFYAQV SDITLAGSVV LSPGQKNKAG ISPCDMPPEV ASLCQANFIM DNAYFCEADA 540
  541 KKCITVAPHV EAESRVEPSF NQEDIYITTE SLTTTAGQSG TTERAVSSEM PVPDYTSIHI 600
  601 IQSPRGLVLN ATALPLPDKE FLSSCGYVST DQLNKIMP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle