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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GDA1_ASPFU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGVDGRHL QTTVSYIHSE ASLYRRTKSP APRTAESVES PQKSSKQRPS SALANMAQTQ  60
   61 RSRYLKTGAI VAALLLMLLW ISPSRPMHPS FPQGQPSTSA PAKGKCSKPH DPKKPLIQYA 120
  121 LMIDAGSQGS RIHVYRFNNC GPSPELEDEV FFQTEPKKGG SGLSSYKEDA EGAAKSLDPL 180
  181 MEVAMKNVPD EYKSCSPIAV KATAGLRMLG PELSQKILDA VRNRLETVYP FPVVSKEKGG 240
  241 VEIMDGSDEG VYAWITTNYL LGKIGGPDET PTAAVFDLGG GSTQIVFQPT FPKSKSGGMP 300
  301 ERLSEGDHKY DLQFGGRHFE LYQHSHLGYG LMAARKAIHT SIIENMLASS PKDLSWLKQP 360
  361 IPNPCIGPEM EKNVTLEFPE GHKLAPEVQV TMVGPKVGST AAQCRGLAEK TLNKEAACTL 420
  421 APCSFNGVHQ PSLEKTFARE DVYIFSYFYD RTKPLGMPDS FTLDELHQLT STVCGGEDSW 480
  481 GIFAGIEGAL KELRDRPEWC LDLNFMMSLL HTGYEMPLSR EVKIAKKIKN RELGWCLGAS 540
  541 LPLLSQESGW TCRIKEVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle